: Data-Field 23170

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Data

49,978 bulk items are available, covering 49,978 participants.

The values held within this field are coded links to files held within a bulk repository, not the actual data itself.

Notes

This dataset was withdrawn in late 2019 after defects were discovered.

Population-level SPB variant results encoded in PLINK format. To download this information use the ukbgene utility with the command

 ukbgene evc -c1

using any recent valid keyfile for the Application. The associated fam files can be downloaded with the command

 ukbgene evc -c1 -m

Note that, unlike the genotyped and imputed information, all of the data for the whole genome is stored in a single file with properties:

Size: 130504562763 Bytes
MD5: ed7335777fc5128978cdb314957131ce

The corresponding bim file is available as Resource 910.

1 Related Data-Field

Field ID	Description	Relationship
23160	Population-level FE variants, PLINK ...	Field 23160 is the FE analogue of SPB Current Field

8 Resources

Preview	Name	Res ID
	BIM index file for SPB exome data	910
	Exome sequencing and characterization of coding variation	572347
	Pre-processed version of genomic reference used in Whole Exome Sequencing by FE pipeline	1000
	Pre-processed version of genomic reference used in Whole Exome Sequencing by SPB pipeline	838
	Target region used by the WES capture experiment (BED file)	3803
	Target region used by the WES capture experiment (BED file) - obsolete	3801
	Target region where at least one alternative contig is derived (BED file)	3802
	Targets within the initial 50k FE data release affected by non-alt aware mapping (BED file)	1911

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