UKB : Data-Field 23173

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Data

49,991 bulk items are available, covering 49,991 participants.

The values held within this field are coded links to files held within a bulk repository, not the actual data itself.

Counts of participants/items last updated 09 Feb 2020.

Notes

This dataset was withdrawn in late 2019 after defects were discovered.

Exome SPB CRAM files

These files are typically around 800MB per participant.

Files are downloaded using the ukbfetch utility as described in Resource 644.

3 Categories

Category ID	Description	Items
170	Exome sequences	10
728	Genome sequencing	9
100314	Genomics	+115

4 Related Data-Fields

Field ID	Description	Relationship
23163	Exome FE CRAM files	Field 23163 is the FE analogue of SPB Current Field
23178	Exome SPB CRAM files	Field 23178 replaced the invalid Current Field
23174	INVALID Exome SPB CRAM indices	Field 23174 provides the index for Current Field
23171	INVALID Exome SPB variant call files ...	Field 23171 is derived from Current Field

6 Resources

Preview	Name	Res ID
	Exome sequencing and characterization of coding variation	572347
	Pre-processed version of genomic reference used in Whole Exome Sequencing by FE pipeline	1000
	Pre-processed version of genomic reference used in Whole Exome Sequencing by SPB pipeline	838
	Target region used by the WES capture experiment (BED file)	3801
	Target region where at least one alternative contig is derived (BED file)	3802
	Targets within the initial 50k FE data release affected by non-alt aware mapping (BED file)	1911

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