|Name:||Automating gene data download|
This scripts assists in downloading bulk genome information by looping through all the chromosomes for a particular file type. It takes a single parameter specifying the Field ID of the data to acquire. The Application specific authentication file ".ukbkey" must also be present in the current directory.
- "gene_multi.sh 22418" will download all genotype calls information,
- "gene_multi.sh 22438" will download all haplotype information,
This resource can be downloaded or viewed using the link: gene_multi.txt
If you have wget available (typically on linux systems), then you can also obtain a copy using the command
wget -nd biobank.ctsu.ox.ac.uk/ukb/ukb/misc/gene_multi.txt