Description: Genotyped SNPs

The results of the UKB genotyping exercise to determine 800,000 SNPs using a custom chip.
Properties included are:

1. affy_id
2. rs_id
3. chr_id
4. pos_int
5. pos_end_int
6. nitems
7. num_aa0
8. num_ab1
9. num_bb2
10. num_x3
11. loctype_int
12. strand
13. strand_vs_snp
14. ref
15. allele_a
16. allele_b

Select preferred format below then click Download to retrieve a copy of schema 15.

If you have wget available (typically on linux systems), then you can also obtain this schema using the command(s)

• wget -nd -O snps.txt "biobank.ctsu.ox.ac.uk/ukb/scdown.cgi?fmt=txt&id=15" (tab separated)
• wget -nd -O snps.xml "biobank.ctsu.ox.ac.uk/ukb/scdown.cgi?fmt=xml&id=15" (pseudo-xml)