: Data-Field 23196

Data-Field 23196

Description:	Whole genome GATK joint call pVCF
Category:	Genomics ⏵ Whole genome sequences ⏵ Previous WGS releases ⏵ Deprecated Datasets

150,000

Integer, blocks

Both sexes

Sep 2020

150,000

Records

Singular

Oct 2020

Accruing

Primary

No

3

This information is regarded as restricted and will be supplied to researchers only when absolutely necessary.

See the Related Data-Fields tab below for any unrestricted alternatives.

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Data

150,000 items are available, covering 150,000 participants.
Some values have special meanings defined by Data-Coding 4982.
Units of measurement are blocks.

150000 items have value -1 (Data not accessible to main repository)

Notes

Joint variant calling for the first 150,000 participants sequenced in the main phase of the whole genome sequencing project. This joint variant call was performed using GATK.

This data is now deprecated and superceded by Field 24304. No further joint variant calls using GATK pipelines are planned.

Coding 4982 defines 1 special value:

-1 represents "Data not accessible to main repository"

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