: Category 199001

Category 199001
Genomics ⏵ Genotypes ⏵ Interim genotype release

Description

This category groups together data fields which were relevant to the initial genotype data release (150K people) but became obsolete when the main genotyping results (488K people) were released in 2017. The fields here are presented for reference only and may not be selected for download. The various Resource materials should be regarded as obsolete as, generally, they were superceded or invalidated when the main genotyping results were release.

Category ID	Description	Items
100316	Genotype confidences	(25)
100317	Genotyping intensities	(27)

Field ID	Description
22050	UKBiLEVE Affymetrix quality control for samples	*
22051	UKBiLEVE genotype quality control for samples
22011	Genetic relatedness pairing
22018	Genetic relatedness exclusions
22012	Genetic relatedness factor
22013	Genetic relatedness IBS0
22010	Recommended genomic analysis exclusions
22052	UKBiLEVE unrelatedness indicator

Preview	Name	Res ID
	Affymetrix genotype data generation - interim release	155582
	Affymetrix genotype sample processing - interim release	155583
	Analysis workflow for UKB Axiom Array - interim release	157002
	Axiom genotyping solution data analysis guide - interim release	157021
	Example Calls file in Basic format	149842
	Example Calls file in UKB format	149841
	Example Calls mapfile in Ped format	149844
	Example Calls pedfile in Ped format	149843
	Genotype data mapping	149660
	Genotype imputation and genetic association studies using UK Biobank data	157020
	Genotyping and quality control for UK Biobank - interim release	155580
	Probeset usage	149640
	SNPs recommended for exclusion from analyses	976
	UK Biobank / UK BiLEVE low concordance SNPs	483
	UK Biobank sample processing workflow and preparation of DNA for genotyping - interim release	155581
	Imputed minor allele frequencies for Chromosome 1	1201
	Imputed minor allele frequencies for Chromosome 2	1202
	Imputed minor allele frequencies for Chromosome 3	1203
	Imputed minor allele frequencies for Chromosome 4	1204
	Imputed minor allele frequencies for Chromosome 5	1205
	Imputed minor allele frequencies for Chromosome 6	1206
	Imputed minor allele frequencies for Chromosome 7	1207
	Imputed minor allele frequencies for Chromosome 8	1208
	Imputed minor allele frequencies for Chromosome 9	1209
	Imputed minor allele frequencies for Chromosome 10	1210
	Imputed minor allele frequencies for Chromosome 11	1211
	Imputed minor allele frequencies for Chromosome 12	1212
	Imputed minor allele frequencies for Chromosome 13	1213
	Imputed minor allele frequencies for Chromosome 14	1214
	Imputed minor allele frequencies for Chromosome 15	1215
	Imputed minor allele frequencies for Chromosome 16	1216
	Imputed minor allele frequencies for Chromosome 17	1217
	Imputed minor allele frequencies for Chromosome 18	1218
	Imputed minor allele frequencies for Chromosome 19	1219
	Imputed minor allele frequencies for Chromosome 20	1220
	Imputed minor allele frequencies for Chromosome 21	1221
	Imputed minor allele frequencies for Chromosome 22	1222

Description

2 Sub-Categories

8 Data-Fields

1 Parent Category

37 Resources